Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.89■□□□□ 0.77
Mmp20P57748 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp20P57748 Gm44771-201ENSMUST00000206975 626 ntBASIC19.89■□□□□ 0.77
Mmp20P57748 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.89■□□□□ 0.77
Mmp20P57748 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.89■□□□□ 0.77
Mmp20P57748 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.89■□□□□ 0.77
Mmp20P57748 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.89■□□□□ 0.77
Mmp20P57748 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp20P57748 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp20P57748 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp20P57748 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp20P57748 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.88■□□□□ 0.77
Mmp20P57748 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Mmp20P57748 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Mmp20P57748 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.88■□□□□ 0.77
Mmp20P57748 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.88■□□□□ 0.77
Mmp20P57748 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp20P57748 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Mmp20P57748 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.87■□□□□ 0.77
Mmp20P57748 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp20P57748 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Mmp20P57748 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Mmp20P57748 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.86■□□□□ 0.77
Mmp20P57748 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.86■□□□□ 0.77
Mmp20P57748 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp20P57748 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Mmp20P57748 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Mmp20P57748 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp20P57748 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp20P57748 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp20P57748 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.85■□□□□ 0.77
Mmp20P57748 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp20P57748 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Mmp20P57748 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp20P57748 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Mmp20P57748 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.85■□□□□ 0.77
Mmp20P57748 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp20P57748 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp20P57748 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Mmp20P57748 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Mmp20P57748 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp20P57748 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Mmp20P57748 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Mmp20P57748 Gm34391-201ENSMUST00000203706 907 ntBASIC19.84■□□□□ 0.77
Mmp20P57748 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.84■□□□□ 0.77
Mmp20P57748 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Mmp20P57748 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp20P57748 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp20P57748 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp20P57748 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp20P57748 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp20P57748 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp20P57748 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp20P57748 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.83■□□□□ 0.77
Mmp20P57748 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp20P57748 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp20P57748 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.83■□□□□ 0.77
Mmp20P57748 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms