Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.68■□□□□ 0.74
Usp25P57080 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Usp25P57080 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.67■□□□□ 0.74
Usp25P57080 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp25P57080 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp25P57080 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usp25P57080 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp25P57080 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp25P57080 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.66■□□□□ 0.74
Usp25P57080 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.66■□□□□ 0.74
Usp25P57080 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp25P57080 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Usp25P57080 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.66■□□□□ 0.74
Usp25P57080 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp25P57080 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Usp25P57080 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.65■□□□□ 0.74
Usp25P57080 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 AV356131-201ENSMUST00000206201 750 ntBASIC19.65■□□□□ 0.74
Usp25P57080 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.65■□□□□ 0.74
Usp25P57080 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp25P57080 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp25P57080 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp25P57080 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp25P57080 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.64■□□□□ 0.73
Usp25P57080 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Usp25P57080 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp25P57080 Gm7514-201ENSMUST00000209475 934 ntBASIC19.64■□□□□ 0.73
Usp25P57080 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.64■□□□□ 0.73
Usp25P57080 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Usp25P57080 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp25P57080 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.64■□□□□ 0.73
Usp25P57080 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp25P57080 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp25P57080 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.64■□□□□ 0.73
Usp25P57080 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp25P57080 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp25P57080 Gm42569-201ENSMUST00000200539 472 ntBASIC19.63■□□□□ 0.73
Usp25P57080 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.63■□□□□ 0.73
Usp25P57080 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Usp25P57080 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.63■□□□□ 0.73
Usp25P57080 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp25P57080 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp25P57080 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp25P57080 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp25P57080 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp25P57080 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.62■□□□□ 0.73
Usp25P57080 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp25P57080 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp25P57080 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.62■□□□□ 0.73
Usp25P57080 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp25P57080 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms