Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-2P42586 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Nkx2-2P42586 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-2P42586 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-2P42586 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-2P42586 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-2P42586 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-2P42586 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.92■□□□□ 0.14
Nkx2-2P42586 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.92■□□□□ 0.14
Nkx2-2P42586 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Gm10812-201ENSMUST00000099864 546 ntBASIC15.92■□□□□ 0.14
Nkx2-2P42586 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-2P42586 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.91■□□□□ 0.14
Nkx2-2P42586 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-2P42586 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.9■□□□□ 0.14
Nkx2-2P42586 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-2P42586 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nkx2-2P42586 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Nkx2-2P42586 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Gm715-201ENSMUST00000117865 831 ntBASIC15.89■□□□□ 0.13
Nkx2-2P42586 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Gm37025-201ENSMUST00000195159 829 ntBASIC15.89■□□□□ 0.13
Nkx2-2P42586 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.89■□□□□ 0.13
Nkx2-2P42586 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-2P42586 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Gm12085-201ENSMUST00000119263 940 ntBASIC15.88■□□□□ 0.13
Nkx2-2P42586 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.88■□□□□ 0.13
Nkx2-2P42586 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.88■□□□□ 0.13
Nkx2-2P42586 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.88■□□□□ 0.13
Nkx2-2P42586 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms