Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.71■□□□□ 0.43
Rb1P13405 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rb1P13405 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rb1P13405 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rb1P13405 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.71■□□□□ 0.43
Rb1P13405 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Rb1P13405 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rb1P13405 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rb1P13405 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rb1P13405 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.7■□□□□ 0.42
Rb1P13405 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Rb1P13405 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Rb1P13405 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.7■□□□□ 0.42
Rb1P13405 Gm11539-201ENSMUST00000119837 557 ntBASIC17.7■□□□□ 0.42
Rb1P13405 Gm13436-201ENSMUST00000120418 567 ntBASIC17.7■□□□□ 0.42
Rb1P13405 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rb1P13405 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.7■□□□□ 0.42
Rb1P13405 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rb1P13405 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rb1P13405 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rb1P13405 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.7■□□□□ 0.42
Rb1P13405 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rb1P13405 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.69■□□□□ 0.42
Rb1P13405 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.69■□□□□ 0.42
Rb1P13405 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Gm12382-201ENSMUST00000122005 922 ntBASIC17.69■□□□□ 0.42
Rb1P13405 Gm6659-201ENSMUST00000174752 547 ntBASIC17.69■□□□□ 0.42
Rb1P13405 Gm3375-201ENSMUST00000203929 796 ntBASIC17.69■□□□□ 0.42
Rb1P13405 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.69■□□□□ 0.42
Rb1P13405 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.69■□□□□ 0.42
Rb1P13405 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rb1P13405 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.68■□□□□ 0.42
Rb1P13405 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Rb1P13405 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.68■□□□□ 0.42
Rb1P13405 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rb1P13405 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 Gm21362-201ENSMUST00000194272 928 ntBASIC17.68■□□□□ 0.42
Rb1P13405 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rb1P13405 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.68■□□□□ 0.42
Rb1P13405 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rb1P13405 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rb1P13405 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rb1P13405 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rb1P13405 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rb1P13405 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.66■□□□□ 0.42
Rb1P13405 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.66■□□□□ 0.42
Rb1P13405 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms