Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.54■□□□□ 0.08
Hdac3O88895 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.54■□□□□ 0.08
Hdac3O88895 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hdac3O88895 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.54■□□□□ 0.08
Hdac3O88895 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.54■□□□□ 0.08
Hdac3O88895 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hdac3O88895 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac3O88895 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Hdac3O88895 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hdac3O88895 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hdac3O88895 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Hdac3O88895 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.53■□□□□ 0.08
Hdac3O88895 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.53■□□□□ 0.08
Hdac3O88895 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac3O88895 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac3O88895 Dio3-201ENSMUST00000097228 1449 ntBASIC15.52■□□□□ 0.08
Hdac3O88895 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac3O88895 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac3O88895 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac3O88895 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac3O88895 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac3O88895 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.52■□□□□ 0.08
Hdac3O88895 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.52■□□□□ 0.08
Hdac3O88895 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Hdac3O88895 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.52■□□□□ 0.07
Hdac3O88895 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.52■□□□□ 0.07
Hdac3O88895 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Hdac3O88895 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hdac3O88895 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hdac3O88895 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hdac3O88895 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Hdac3O88895 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Hdac3O88895 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.51■□□□□ 0.07
Hdac3O88895 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Hdac3O88895 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.51■□□□□ 0.07
Hdac3O88895 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Hdac3O88895 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hdac3O88895 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.5■□□□□ 0.07
Hdac3O88895 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.5■□□□□ 0.07
Hdac3O88895 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.5■□□□□ 0.07
Hdac3O88895 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Hdac3O88895 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Hdac3O88895 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Hdac3O88895 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hdac3O88895 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Hdac3O88895 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Hdac3O88895 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hdac3O88895 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Hdac3O88895 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hdac3O88895 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hdac3O88895 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Hdac3O88895 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Hdac3O88895 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Hdac3O88895 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Hdac3O88895 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Hdac3O88895 Gm11927-201ENSMUST00000118472 759 ntBASIC15.49■□□□□ 0.07
Hdac3O88895 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.49■□□□□ 0.07
Hdac3O88895 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.49■□□□□ 0.07
Hdac3O88895 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.49■□□□□ 0.07
Hdac3O88895 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms