Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.93■□□□□ 0.3
Cacna1hO88427 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cacna1hO88427 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1hO88427 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1hO88427 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1hO88427 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1hO88427 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1hO88427 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.93■□□□□ 0.3
Cacna1hO88427 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.93■□□□□ 0.3
Cacna1hO88427 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.93■□□□□ 0.3
Cacna1hO88427 Rprl3-201ENSMUST00000157400 290 ntBASIC16.93■□□□□ 0.3
Cacna1hO88427 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.93■□□□□ 0.3
Cacna1hO88427 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1hO88427 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1hO88427 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Gm14140-201ENSMUST00000119999 995 ntBASIC16.92■□□□□ 0.3
Cacna1hO88427 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.92■□□□□ 0.3
Cacna1hO88427 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.92■□□□□ 0.3
Cacna1hO88427 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Cacna1hO88427 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Cacna1hO88427 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cacna1hO88427 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1hO88427 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.91■□□□□ 0.3
Cacna1hO88427 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cacna1hO88427 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.91■□□□□ 0.3
Cacna1hO88427 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cacna1hO88427 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1hO88427 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.9■□□□□ 0.3
Cacna1hO88427 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1hO88427 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1hO88427 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1hO88427 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.9■□□□□ 0.3
Cacna1hO88427 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1hO88427 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1hO88427 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.9■□□□□ 0.3
Cacna1hO88427 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cacna1hO88427 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1hO88427 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cacna1hO88427 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cacna1hO88427 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cacna1hO88427 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.89■□□□□ 0.3
Cacna1hO88427 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Cacna1hO88427 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cacna1hO88427 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1hO88427 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1hO88427 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1hO88427 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Cacna1hO88427 Gm25911-201ENSMUST00000157621 56 ntBASIC16.89■□□□□ 0.29
Cacna1hO88427 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1hO88427 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1hO88427 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cacna1hO88427 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1hO88427 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Cacna1hO88427 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1hO88427 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1hO88427 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Cacna1hO88427 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Gm11025-201ENSMUST00000140773 466 ntBASIC16.88■□□□□ 0.29
Cacna1hO88427 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.88■□□□□ 0.29
Cacna1hO88427 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.88■□□□□ 0.29
Cacna1hO88427 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.88■□□□□ 0.29
Cacna1hO88427 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cacna1hO88427 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.88■□□□□ 0.29
Cacna1hO88427 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.88■□□□□ 0.29
Cacna1hO88427 Gm27321-201ENSMUST00000185021 205 ntBASIC16.88■□□□□ 0.29
Cacna1hO88427 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.88■□□□□ 0.29
Cacna1hO88427 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.88■□□□□ 0.29
Cacna1hO88427 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1hO88427 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cacna1hO88427 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms