Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pja1O55176 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.38■□□□□ 0.53
Pja1O55176 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pja1O55176 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pja1O55176 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pja1O55176 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pja1O55176 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pja1O55176 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.37■□□□□ 0.53
Pja1O55176 Mtag2-201ENSMUST00000058665 714 ntBASIC18.37■□□□□ 0.53
Pja1O55176 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pja1O55176 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pja1O55176 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.37■□□□□ 0.53
Pja1O55176 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pja1O55176 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.37■□□□□ 0.53
Pja1O55176 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pja1O55176 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pja1O55176 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pja1O55176 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pja1O55176 Gm42569-201ENSMUST00000200539 472 ntBASIC18.36■□□□□ 0.53
Pja1O55176 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pja1O55176 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Pja1O55176 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pja1O55176 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pja1O55176 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pja1O55176 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.35■□□□□ 0.53
Pja1O55176 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.35■□□□□ 0.53
Pja1O55176 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pja1O55176 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pja1O55176 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pja1O55176 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.34■□□□□ 0.53
Pja1O55176 Gm11643-201ENSMUST00000119578 864 ntBASIC18.34■□□□□ 0.53
Pja1O55176 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.34■□□□□ 0.53
Pja1O55176 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.34■□□□□ 0.53
Pja1O55176 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pja1O55176 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Pja1O55176 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pja1O55176 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pja1O55176 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pja1O55176 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pja1O55176 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pja1O55176 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Pja1O55176 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pja1O55176 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pja1O55176 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.33■□□□□ 0.52
Pja1O55176 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pja1O55176 Mir6349-201ENSMUST00000184059 97 ntBASIC18.33■□□□□ 0.52
Pja1O55176 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pja1O55176 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pja1O55176 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pja1O55176 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pja1O55176 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pja1O55176 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.32■□□□□ 0.52
Pja1O55176 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Pja1O55176 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.32■□□□□ 0.52
Pja1O55176 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.32■□□□□ 0.52
Pja1O55176 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pja1O55176 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pja1O55176 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.32■□□□□ 0.52
Pja1O55176 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pja1O55176 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pja1O55176 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms