Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Efnb3O35393 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Efnb3O35393 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Efnb3O35393 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Efnb3O35393 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Efnb3O35393 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Efnb3O35393 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Efnb3O35393 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.74□□□□□ -0.21
Efnb3O35393 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Efnb3O35393 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.74□□□□□ -0.21
Efnb3O35393 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 AV356131-201ENSMUST00000206201 750 ntBASIC13.74□□□□□ -0.21
Efnb3O35393 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.74□□□□□ -0.21
Efnb3O35393 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Efnb3O35393 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Efnb3O35393 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Efnb3O35393 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Efnb3O35393 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Efnb3O35393 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Efnb3O35393 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.73□□□□□ -0.21
Efnb3O35393 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.73□□□□□ -0.21
Efnb3O35393 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Efnb3O35393 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Efnb3O35393 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Efnb3O35393 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Efnb3O35393 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.72□□□□□ -0.21
Efnb3O35393 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Efnb3O35393 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.72□□□□□ -0.21
Efnb3O35393 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Efnb3O35393 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Efnb3O35393 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Efnb3O35393 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.71□□□□□ -0.21
Efnb3O35393 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Efnb3O35393 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.71□□□□□ -0.21
Efnb3O35393 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.71□□□□□ -0.21
Efnb3O35393 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.71□□□□□ -0.21
Efnb3O35393 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.71□□□□□ -0.21
Efnb3O35393 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Efnb3O35393 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms