Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hps1O08983 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hps1O08983 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.13■□□□□ 0.17
Hps1O08983 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps1O08983 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.12■□□□□ 0.17
Hps1O08983 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.12■□□□□ 0.17
Hps1O08983 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hps1O08983 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.12■□□□□ 0.17
Hps1O08983 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.12■□□□□ 0.17
Hps1O08983 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.12■□□□□ 0.17
Hps1O08983 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.12■□□□□ 0.17
Hps1O08983 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Hps1O08983 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.12■□□□□ 0.17
Hps1O08983 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.12■□□□□ 0.17
Hps1O08983 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps1O08983 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hps1O08983 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hps1O08983 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Hps1O08983 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.11■□□□□ 0.17
Hps1O08983 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Hps1O08983 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hps1O08983 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Gm37856-201ENSMUST00000191634 999 ntBASIC16.11■□□□□ 0.17
Hps1O08983 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.11■□□□□ 0.17
Hps1O08983 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.11■□□□□ 0.17
Hps1O08983 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Hps1O08983 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps1O08983 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.11■□□□□ 0.17
Hps1O08983 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.1■□□□□ 0.17
Hps1O08983 Gm13146-201ENSMUST00000118508 780 ntBASIC16.1■□□□□ 0.17
Hps1O08983 Gm6420-201ENSMUST00000193885 723 ntBASIC16.1■□□□□ 0.17
Hps1O08983 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.1■□□□□ 0.17
Hps1O08983 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hps1O08983 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Hps1O08983 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Hps1O08983 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.1■□□□□ 0.17
Hps1O08983 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hps1O08983 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps1O08983 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hps1O08983 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hps1O08983 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Hps1O08983 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hps1O08983 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hps1O08983 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hps1O08983 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hps1O08983 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.09■□□□□ 0.17
Hps1O08983 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hps1O08983 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hps1O08983 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.09■□□□□ 0.17
Hps1O08983 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms