Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trove2O08848 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trove2O08848 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Trove2O08848 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trove2O08848 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.83■□□□□ 0.44
Trove2O08848 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trove2O08848 Haglr-201ENSMUST00000100000 2085 ntBASIC17.83■□□□□ 0.44
Trove2O08848 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Trove2O08848 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.82■□□□□ 0.44
Trove2O08848 Gm10849-201ENSMUST00000100397 618 ntBASIC17.82■□□□□ 0.44
Trove2O08848 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.82■□□□□ 0.44
Trove2O08848 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.82■□□□□ 0.44
Trove2O08848 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trove2O08848 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Trove2O08848 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trove2O08848 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trove2O08848 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trove2O08848 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trove2O08848 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.81■□□□□ 0.44
Trove2O08848 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trove2O08848 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trove2O08848 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trove2O08848 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.8■□□□□ 0.44
Trove2O08848 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.8■□□□□ 0.44
Trove2O08848 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trove2O08848 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Trove2O08848 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trove2O08848 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trove2O08848 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Trove2O08848 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trove2O08848 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trove2O08848 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trove2O08848 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trove2O08848 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trove2O08848 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trove2O08848 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.78■□□□□ 0.44
Trove2O08848 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trove2O08848 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.78■□□□□ 0.44
Trove2O08848 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trove2O08848 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
Trove2O08848 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms