Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.02■□□□□ 0.95
Sh3tc1G3X9F6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.02■□□□□ 0.95
Sh3tc1G3X9F6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3tc1G3X9F6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Sh3tc1G3X9F6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3tc1G3X9F6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc1G3X9F6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sh3tc1G3X9F6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.99■□□□□ 0.95
Sh3tc1G3X9F6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sh3tc1G3X9F6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Gm24589-201ENSMUST00000116692 94 ntBASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3tc1G3X9F6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3tc1G3X9F6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3tc1G3X9F6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3tc1G3X9F6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3tc1G3X9F6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3tc1G3X9F6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sh3tc1G3X9F6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3tc1G3X9F6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms