Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smim17A0A504 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smim17A0A504 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smim17A0A504 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.8■□□□□ 0.12
Smim17A0A504 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.8■□□□□ 0.12
Smim17A0A504 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smim17A0A504 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.79■□□□□ 0.12
Smim17A0A504 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smim17A0A504 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim17A0A504 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smim17A0A504 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smim17A0A504 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Smim17A0A504 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smim17A0A504 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.78■□□□□ 0.12
Smim17A0A504 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.78■□□□□ 0.12
Smim17A0A504 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.78■□□□□ 0.12
Smim17A0A504 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.78■□□□□ 0.12
Smim17A0A504 Rps24-207ENSMUST00000224568 714 ntBASIC15.78■□□□□ 0.12
Smim17A0A504 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
Smim17A0A504 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smim17A0A504 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smim17A0A504 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smim17A0A504 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim17A0A504 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Smim17A0A504 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim17A0A504 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smim17A0A504 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Smim17A0A504 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Smim17A0A504 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smim17A0A504 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smim17A0A504 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smim17A0A504 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smim17A0A504 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim17A0A504 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Smim17A0A504 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Smim17A0A504 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smim17A0A504 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Smim17A0A504 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smim17A0A504 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.75■□□□□ 0.11
Smim17A0A504 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smim17A0A504 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smim17A0A504 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smim17A0A504 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms