Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm42569-201ENSMUST00000200539 472 ntBASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm7514-201ENSMUST00000209475 934 ntBASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sirpb1aA0A0A6YYP6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sirpb1aA0A0A6YYP6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm10418-201ENSMUST00000100943 576 ntBASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm7291-201ENSMUST00000199147 382 ntBASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm10493-201ENSMUST00000097270 612 ntBASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm38285-201ENSMUST00000192928 922 ntBASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sirpb1aA0A0A6YYP6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms