Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Haglr-201ENSMUST00000100000 2085 ntBASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm10138-203ENSMUST00000206952 366 ntBASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms