Protein–RNA interactions for Protein: A0A087WP35

Gm28919, Predicted gene 28919, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28919A0A087WP35 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28919A0A087WP35 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm28919A0A087WP35 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28919A0A087WP35 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm28919A0A087WP35 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Gm28919A0A087WP35 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28919A0A087WP35 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.57
Gm28919A0A087WP35 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm28919A0A087WP35 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm28919A0A087WP35 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm28919A0A087WP35 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.58■□□□□ 0.56
Gm28919A0A087WP35 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28919A0A087WP35 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Gm6420-201ENSMUST00000193885 723 ntBASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Gm42569-201ENSMUST00000200539 472 ntBASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28919A0A087WP35 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Nespas-201ENSMUST00000143738 1083 ntBASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28919A0A087WP35 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Gm10849-201ENSMUST00000100397 618 ntBASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28919A0A087WP35 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Gm28919A0A087WP35 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28919A0A087WP35 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28919A0A087WP35 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm28919A0A087WP35 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.53■□□□□ 0.56
Gm28919A0A087WP35 Gm26571-201ENSMUST00000181399 666 ntBASIC18.53■□□□□ 0.56
Gm28919A0A087WP35 Mir8112-201ENSMUST00000184382 131 ntBASIC18.53■□□□□ 0.56
Gm28919A0A087WP35 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms