Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gm10129-202ENSMUST00000193100 1316 ntBASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms