Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav12d-3A0A075B6A4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms