Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Gm11927-201ENSMUST00000118472 759 ntBASIC14.25□□□□□ -0.13
Trav18A0A075B656 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.25□□□□□ -0.13
Trav18A0A075B656 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav18A0A075B656 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Gm13401-201ENSMUST00000117074 291 ntBASIC14.24□□□□□ -0.13
Trav18A0A075B656 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Mtag2-201ENSMUST00000058665 714 ntBASIC14.24□□□□□ -0.13
Trav18A0A075B656 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav18A0A075B656 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.23□□□□□ -0.13
Trav18A0A075B656 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav18A0A075B656 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav18A0A075B656 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.22□□□□□ -0.13
Trav18A0A075B656 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav18A0A075B656 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Gm5408-201ENSMUST00000197998 747 ntBASIC14.21□□□□□ -0.13
Trav18A0A075B656 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav18A0A075B656 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav18A0A075B656 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms