Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Gm12366-201ENSMUST00000121722 873 ntBASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Gm5786-201ENSMUST00000085368 882 ntBASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.75□□□□□ -0.53
Trav3-4A0A075B654 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Gm43759-201ENSMUST00000196925 1261 ntBASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3-4A0A075B654 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms