Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-4A0A075B652 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-4A0A075B652 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Gm11927-201ENSMUST00000118472 759 ntBASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Gm10602-201ENSMUST00000098239 609 ntBASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav5-4A0A075B652 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-4A0A075B652 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-4A0A075B652 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-4A0A075B652 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-4A0A075B652 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-4A0A075B652 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-4A0A075B652 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-4A0A075B652 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms