Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-2A0A075B649 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-2A0A075B649 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13-2A0A075B649 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trav13-2A0A075B649 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav13-2A0A075B649 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms