Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9n-4A0A075B631 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9n-4A0A075B631 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9n-4A0A075B631 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9n-4A0A075B631 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-4A0A075B631 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Gm10849-201ENSMUST00000100397 618 ntBASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Gm38285-201ENSMUST00000192928 922 ntBASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Gm29791-202ENSMUST00000207888 369 ntBASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-4A0A075B631 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Mir5133-201ENSMUST00000174955 77 ntBASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Gm44549-201ENSMUST00000208351 577 ntBASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav9n-4A0A075B631 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms