Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7n-4A0A075B620 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Gm12251-201ENSMUST00000117893 792 ntBASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Smad6-203ENSMUST00000179458 273 ntBASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav7n-4A0A075B620 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7n-4A0A075B620 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Gm22325-201ENSMUST00000158904 308 ntBASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav7n-4A0A075B620 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms