Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm12571-201ENSMUST00000118132 243 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm9119-201ENSMUST00000118866 495 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Gm25392-201ENSMUST00000157335 297 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm23205-201ENSMUST00000158671 103 ntBASIC4.24□□□□□ -1.73
NcanP55066 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Gm23287-201ENSMUST00000179427 116 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NcanP55066 Gm23143-201ENSMUST00000180137 116 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Gm28358-202ENSMUST00000189292 223 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Gm44355-201ENSMUST00000200417 104 ntBASIC4.24□□□□□ -1.73
NcanP55066 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm8035-201ENSMUST00000204625 687 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm17987-201ENSMUST00000206902 603 ntBASIC4.24□□□□□ -1.73
NcanP55066 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.24□□□□□ -1.73
NcanP55066 AC160970.1-201ENSMUST00000219311 475 ntBASIC4.24□□□□□ -1.73
NcanP55066 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm46996-201ENSMUST00000220924 408 ntBASIC4.24□□□□□ -1.73
NcanP55066 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.24□□□□□ -1.73
NcanP55066 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Gm24144-201ENSMUST00000082632 111 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm24871-201ENSMUST00000083099 116 ntBASIC4.24□□□□□ -1.73
NcanP55066 Rnu5g-201ENSMUST00000093721 116 ntBASIC4.24□□□□□ -1.73
NcanP55066 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.24□□□□□ -1.73
NcanP55066 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
NcanP55066 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NcanP55066 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NcanP55066 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NcanP55066 AC132336.1-201ENSMUST00000222844 1740 ntBASIC4.24□□□□□ -1.73
NcanP55066 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.23□□□□□ -1.73
NcanP55066 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.23□□□□□ -1.73
NcanP55066 Gm20541-201ENSMUST00000173035 1406 ntBASIC4.23□□□□□ -1.73
NcanP55066 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NcanP55066 Gm12448-201ENSMUST00000118852 655 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm11600-201ENSMUST00000119592 240 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm12691-201ENSMUST00000120186 456 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm13080-201ENSMUST00000120556 420 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm12978-201ENSMUST00000121250 522 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.23□□□□□ -1.73
NcanP55066 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NcanP55066 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NcanP55066 Gm25373-201ENSMUST00000158156 115 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm26354-201ENSMUST00000158221 129 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm2862-201ENSMUST00000161524 328 ntBASIC4.23□□□□□ -1.73
NcanP55066 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NcanP55066 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NcanP55066 Gm29668-201ENSMUST00000187802 315 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm37098-201ENSMUST00000192290 244 ntBASIC4.23□□□□□ -1.73
NcanP55066 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.23□□□□□ -1.73
NcanP55066 Gm31520-201ENSMUST00000203048 733 ntBASIC4.23□□□□□ -1.73
NcanP55066 Gm4263-202ENSMUST00000221392 667 ntBASIC4.23□□□□□ -1.73
NcanP55066 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NcanP55066 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
NcanP55066 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NcanP55066 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.23□□□□□ -1.73
NcanP55066 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
NcanP55066 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.23□□□□□ -1.73
NcanP55066 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.23□□□□□ -1.73
NcanP55066 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NcanP55066 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NcanP55066 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.22□□□□□ -1.73
NcanP55066 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NcanP55066 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NcanP55066 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NcanP55066 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
NcanP55066 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.22□□□□□ -1.73
NcanP55066 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
NcanP55066 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NcanP55066 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NcanP55066 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
NcanP55066 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NcanP55066 Gm14050-201ENSMUST00000117052 346 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm15613-201ENSMUST00000118396 326 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm11719-201ENSMUST00000119399 351 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm12327-201ENSMUST00000121729 1168 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm22958-201ENSMUST00000122512 184 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC4.22□□□□□ -1.73
NcanP55066 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC4.22□□□□□ -1.73
NcanP55066 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm25598-201ENSMUST00000179031 107 ntBASIC4.22□□□□□ -1.73
NcanP55066 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NcanP55066 Gm18406-201ENSMUST00000185872 669 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm28830-201ENSMUST00000188192 213 ntBASIC4.22□□□□□ -1.73
NcanP55066 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms