Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm12393-201ENSMUST00000117084 848 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm8430-201ENSMUST00000119780 471 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm11403-201ENSMUST00000122195 369 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm24754-201ENSMUST00000177997 107 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm26933-201ENSMUST00000182320 827 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm18775-201ENSMUST00000190763 586 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm37881-201ENSMUST00000193001 421 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm9236-201ENSMUST00000196892 587 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm4859-201ENSMUST00000199625 787 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm44404-201ENSMUST00000203979 636 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 CT010480.5-201ENSMUST00000225026 217 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 AC133101.1-201ENSMUST00000226939 1199 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col17a1Q07563 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col17a1Q07563 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col17a1Q07563 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col17a1Q07563 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Col17a1Q07563 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm37562-201ENSMUST00000194763 4328 ntBASIC6.5□□□□□ -1.37
Col17a1Q07563 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col17a1Q07563 Gm37514-201ENSMUST00000194512 2753 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm6373-201ENSMUST00000121026 360 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm11982-201ENSMUST00000121480 314 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 n-R5s68-201ENSMUST00000122639 82 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm28803-201ENSMUST00000190385 764 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm45673-201ENSMUST00000210293 358 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC6.49□□□□□ -1.37
Col17a1Q07563 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Col17a1Q07563 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 AC140209.1-204ENSMUST00000226736 739 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm42946-201ENSMUST00000196108 2570 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col17a1Q07563 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col17a1Q07563 Gm37661-201ENSMUST00000191863 1550 ntBASIC6.49□□□□□ -1.37
Col17a1Q07563 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col17a1Q07563 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col17a1Q07563 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col17a1Q07563 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm7974-201ENSMUST00000117154 408 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm14989-201ENSMUST00000120497 207 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm12900-201ENSMUST00000120919 573 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm14366-201ENSMUST00000121970 730 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Klra11-ps-201ENSMUST00000122033 810 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm8080-201ENSMUST00000122046 1155 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm13852-201ENSMUST00000122350 242 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm44879-201ENSMUST00000207007 503 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm4921-201ENSMUST00000219804 992 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm24522-201ENSMUST00000083964 108 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col17a1Q07563 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col17a1Q07563 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col17a1Q07563 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col17a1Q07563 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC6.48□□□□□ -1.37
Col17a1Q07563 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col17a1Q07563 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col17a1Q07563 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col17a1Q07563 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm14534-201ENSMUST00000120045 357 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm6214-201ENSMUST00000178845 541 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm18828-202ENSMUST00000181035 310 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Mir7009-201ENSMUST00000184519 64 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm37659-201ENSMUST00000194574 111 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm35212-201ENSMUST00000196672 606 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm44256-201ENSMUST00000203304 335 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm19196-201ENSMUST00000209258 357 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC6.47□□□□□ -1.37
Col17a1Q07563 AC117202.3-201ENSMUST00000228532 310 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Mir34b-201ENSMUST00000083558 84 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col17a1Q07563 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col17a1Q07563 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm37527-201ENSMUST00000192406 3547 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col17a1Q07563 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.47□□□□□ -1.37
Col17a1Q07563 Svet1-201ENSMUST00000209370 3940 ntBASIC6.47□□□□□ -1.37
Col17a1Q07563 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms