Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm43319-201ENSMUST00000198036 2270 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm3835-201ENSMUST00000120752 403 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm11896-201ENSMUST00000121105 820 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm11229-201ENSMUST00000121993 437 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm15022-201ENSMUST00000122074 746 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm18520-201ENSMUST00000174783 658 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Mir7118-201ENSMUST00000197760 61 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Gm44223-201ENSMUST00000204854 114 ntBASIC3.02□□□□□ -1.93
Col6a6Q8C6K9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm23123-201ENSMUST00000157648 144 ntBASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm21827-201ENSMUST00000178247 423 ntBASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm44256-201ENSMUST00000203304 335 ntBASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm6064-201ENSMUST00000203999 454 ntBASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col6a6Q8C6K9 Gm23577-201ENSMUST00000103950 110 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm13692-201ENSMUST00000120774 371 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Mir3092-201ENSMUST00000174954 96 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm22859-201ENSMUST00000174978 122 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC3□□□□□ -1.93
Col6a6Q8C6K9 CT030182.3-201ENSMUST00000225986 582 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm37911-201ENSMUST00000193099 1545 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm43845-201ENSMUST00000202462 1820 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm13310-201ENSMUST00000120962 1381 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm12586-201ENSMUST00000117328 1316 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm11260-201ENSMUST00000121163 942 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm22664-201ENSMUST00000158719 105 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm18604-201ENSMUST00000172535 558 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Mir3470b-201ENSMUST00000175563 126 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm8874-201ENSMUST00000196826 286 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3□□□□□ -1.93
Col6a6Q8C6K9 AC158523.1-201ENSMUST00000221398 328 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 AC154515.2-201ENSMUST00000226093 406 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 AC121542.1-201ENSMUST00000227245 721 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col6a6Q8C6K9 Gm7754-201ENSMUST00000223075 2064 ntBASIC3□□□□□ -1.93
Col6a6Q8C6K9 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 AC152981.1-201ENSMUST00000218320 2480 ntBASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Gm13761-201ENSMUST00000117238 807 ntBASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Mir28a-201ENSMUST00000083560 86 ntBASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Gm3933-201ENSMUST00000195391 439 ntBASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.99□□□□□ -1.93
Col6a6Q8C6K9 Gm30534-201ENSMUST00000217928 207 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms