Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 AC162908.1-201ENSMUST00000219164 4563 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm24914-201ENSMUST00000157285 313 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm25447-201ENSMUST00000158997 128 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Mir6406-201ENSMUST00000183592 120 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Mir7226-201ENSMUST00000184953 60 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm19726-201ENSMUST00000205008 240 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 AC122024.1-201ENSMUST00000219276 4850 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm18719-201ENSMUST00000196696 1413 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 AC122357.1-201ENSMUST00000221652 1515 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm15399-201ENSMUST00000118055 724 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm4914-201ENSMUST00000119757 459 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm18867-201ENSMUST00000198022 1179 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm36944-201ENSMUST00000192257 2759 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm24670-201ENSMUST00000104154 132 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm24274-201ENSMUST00000116787 124 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Gm9890-201ENSMUST00000171867 537 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 AC154515.2-201ENSMUST00000226093 406 ntBASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ush2AQ2QI47 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm5060-201ENSMUST00000120072 599 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm14694-201ENSMUST00000121856 282 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm23548-201ENSMUST00000158963 106 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm22500-201ENSMUST00000158982 99 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm42960-201ENSMUST00000202160 241 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 AC154374.1-201ENSMUST00000215351 351 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm7588-201ENSMUST00000216866 571 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm36931-201ENSMUST00000192997 4801 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 AC131720.1-201ENSMUST00000218629 2132 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm3584-201ENSMUST00000173822 2565 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm24601-201ENSMUST00000157970 143 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm37751-201ENSMUST00000192440 1198 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm5176-202ENSMUST00000220267 583 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm37329-201ENSMUST00000192973 2057 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm28634-201ENSMUST00000191087 2613 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Gm42474-201ENSMUST00000201073 505 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC1.8□□□□□ -2.12
Ush2AQ2QI47 AC069074.2-201ENSMUST00000217819 428 ntBASIC1.8□□□□□ -2.12
Ush2AQ2QI47 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms