Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm12281-201ENSMUST00000119536 298 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm15106-201ENSMUST00000119691 821 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm16100-201ENSMUST00000120489 231 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm11804-201ENSMUST00000121663 468 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm12693-201ENSMUST00000121965 483 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm22136-201ENSMUST00000158751 268 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm10087-201ENSMUST00000167650 330 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm22646-201ENSMUST00000175130 115 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Mir3090-201ENSMUST00000175597 87 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm27148-201ENSMUST00000185086 160 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm37746-201ENSMUST00000193249 198 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm42475-201ENSMUST00000201212 295 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm8423-201ENSMUST00000211387 607 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Clec2j-201ENSMUST00000032517 515 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm26225-201ENSMUST00000082508 135 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Mir133b-201ENSMUST00000083546 119 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm7164-201ENSMUST00000117503 450 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm11577-201ENSMUST00000118030 737 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm11826-201ENSMUST00000118781 438 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm12787-201ENSMUST00000119234 396 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm15044-201ENSMUST00000120703 598 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm22106-201ENSMUST00000122544 127 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm25824-201ENSMUST00000157092 121 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23124-201ENSMUST00000157650 107 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm24857-201ENSMUST00000158061 310 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23016-201ENSMUST00000158431 62 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm24306-201ENSMUST00000180229 79 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm26746-201ENSMUST00000181722 487 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm27161-201ENSMUST00000183960 562 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm44523-201ENSMUST00000205616 417 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm45150-201ENSMUST00000206051 467 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm7042-201ENSMUST00000223027 384 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23515-201ENSMUST00000082829 107 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Mir188-201ENSMUST00000083464 68 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23795-201ENSMUST00000084006 137 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sh3rf1Q69ZI1 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms