Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.59□□□□□ -1.83
HttP42859 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HttP42859 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
HttP42859 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
HttP42859 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HttP42859 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.59□□□□□ -1.84
HttP42859 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.59□□□□□ -1.84
HttP42859 Gm37533-201ENSMUST00000193848 545 ntBASIC3.59□□□□□ -1.84
HttP42859 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
HttP42859 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.59□□□□□ -1.84
HttP42859 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HttP42859 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 Gm37930-201ENSMUST00000194308 1886 ntBASIC3.58□□□□□ -1.84
HttP42859 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HttP42859 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HttP42859 Gm37531-201ENSMUST00000191628 5415 ntBASIC3.58□□□□□ -1.84
HttP42859 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 Gm26866-201ENSMUST00000180414 802 ntBASIC3.58□□□□□ -1.84
HttP42859 Gm44676-201ENSMUST00000208520 3055 ntBASIC3.58□□□□□ -1.84
HttP42859 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HttP42859 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
HttP42859 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC3.58□□□□□ -1.84
HttP42859 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC3.58□□□□□ -1.84
HttP42859 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HttP42859 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.58□□□□□ -1.84
HttP42859 Gm14627-201ENSMUST00000118931 567 ntBASIC3.58□□□□□ -1.84
HttP42859 Gm22227-201ENSMUST00000157356 259 ntBASIC3.58□□□□□ -1.84
HttP42859 Gm22141-201ENSMUST00000157403 277 ntBASIC3.58□□□□□ -1.84
HttP42859 Mir6401-201ENSMUST00000184499 109 ntBASIC3.58□□□□□ -1.84
HttP42859 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HttP42859 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC3.58□□□□□ -1.84
HttP42859 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
HttP42859 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.57□□□□□ -1.84
HttP42859 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.57□□□□□ -1.84
HttP42859 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC3.57□□□□□ -1.84
HttP42859 Gm16332-201ENSMUST00000134229 2967 ntBASIC3.57□□□□□ -1.84
HttP42859 Gm27254-201ENSMUST00000183926 517 ntBASIC3.57□□□□□ -1.84
HttP42859 Gm36371-201ENSMUST00000209043 1103 ntBASIC3.57□□□□□ -1.84
HttP42859 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.57□□□□□ -1.84
HttP42859 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.57□□□□□ -1.84
HttP42859 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HttP42859 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HttP42859 Gm13459-201ENSMUST00000121558 646 ntBASIC3.57□□□□□ -1.84
HttP42859 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.57□□□□□ -1.84
HttP42859 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
HttP42859 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC3.57□□□□□ -1.84
HttP42859 Gm45240-201ENSMUST00000211437 674 ntBASIC3.57□□□□□ -1.84
HttP42859 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.57□□□□□ -1.84
HttP42859 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.57□□□□□ -1.84
HttP42859 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.57□□□□□ -1.84
HttP42859 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HttP42859 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.57□□□□□ -1.84
HttP42859 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.57□□□□□ -1.84
HttP42859 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HttP42859 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HttP42859 Gm12998-201ENSMUST00000122445 789 ntBASIC3.57□□□□□ -1.84
HttP42859 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC3.57□□□□□ -1.84
HttP42859 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HttP42859 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HttP42859 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
HttP42859 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HttP42859 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.56□□□□□ -1.84
HttP42859 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HttP42859 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HttP42859 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HttP42859 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HttP42859 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HttP42859 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.56□□□□□ -1.84
HttP42859 Gm15103-201ENSMUST00000119893 871 ntBASIC3.56□□□□□ -1.84
HttP42859 Gm5123-201ENSMUST00000121905 837 ntBASIC3.56□□□□□ -1.84
HttP42859 Gm5755-201ENSMUST00000152394 837 ntBASIC3.56□□□□□ -1.84
HttP42859 Gm24819-201ENSMUST00000175094 166 ntBASIC3.56□□□□□ -1.84
HttP42859 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HttP42859 Gm19726-201ENSMUST00000205008 240 ntBASIC3.56□□□□□ -1.84
HttP42859 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HttP42859 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HttP42859 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
HttP42859 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HttP42859 Gm13311-201ENSMUST00000117863 379 ntBASIC3.56□□□□□ -1.84
HttP42859 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HttP42859 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HttP42859 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HttP42859 AC161256.1-201ENSMUST00000217312 213 ntBASIC3.56□□□□□ -1.84
HttP42859 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.56□□□□□ -1.84
HttP42859 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.56□□□□□ -1.84
HttP42859 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.56□□□□□ -1.84
HttP42859 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HttP42859 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HttP42859 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
HttP42859 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HttP42859 Gm15166-201ENSMUST00000120790 385 ntBASIC3.55□□□□□ -1.84
HttP42859 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HttP42859 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms