Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.91■□□□□ 0.62
Nr1h3Q9Z0Y9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm16061-201ENSMUST00000122167 857 ntBASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nr1h3Q9Z0Y9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nr1h3Q9Z0Y9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Nr1h3Q9Z0Y9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Rarb-207ENSMUST00000225921 2756 ntBASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Tgds-204ENSMUST00000228543 1594 ntBASIC18.89■□□□□ 0.61
Nr1h3Q9Z0Y9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm13474-201ENSMUST00000122466 815 ntBASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nr1h3Q9Z0Y9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm24841-201ENSMUST00000158676 357 ntBASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm6345-202ENSMUST00000180900 204 ntBASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nr1h3Q9Z0Y9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm7638-201ENSMUST00000121348 967 ntBASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm33142-201ENSMUST00000193913 867 ntBASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms