Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube4bQ9ES00 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Gm13216-201ENSMUST00000117145 591 ntBASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4bQ9ES00 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube4bQ9ES00 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube4bQ9ES00 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Gm27801-201ENSMUST00000184174 223 ntBASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.73■□□□□ 0.27
Ube4bQ9ES00 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms