Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp48Q9D361 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Gm27011-201ENSMUST00000182352 972 ntBASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Snrnp48Q9D361 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.37■□□□□ 0.37
Snrnp48Q9D361 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp48Q9D361 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Gm22240-201ENSMUST00000175225 82 ntBASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Gm10517-202ENSMUST00000192970 758 ntBASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp48Q9D361 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp48Q9D361 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp48Q9D361 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms