Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Gm19094-201ENSMUST00000209791 1246 ntBASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpl39lQ9CQD0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpl39lQ9CQD0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rpl39lQ9CQD0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rpl39lQ9CQD0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rpl39lQ9CQD0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Dancr-204ENSMUST00000132389 2347 ntBASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpl39lQ9CQD0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39lQ9CQD0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms