Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rnf111Q99ML9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf111Q99ML9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf111Q99ML9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf111Q99ML9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf111Q99ML9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf111Q99ML9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Rnf111Q99ML9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Gm4968-201ENSMUST00000071458 858 ntBASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf111Q99ML9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf111Q99ML9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf111Q99ML9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf111Q99ML9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf111Q99ML9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf111Q99ML9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf111Q99ML9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.86■□□□□ 0.29
Rnf111Q99ML9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf111Q99ML9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms