Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Clp1Q99LI9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clp1Q99LI9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clp1Q99LI9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clp1Q99LI9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.38■□□□□ 0.53
Clp1Q99LI9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.38■□□□□ 0.53
Clp1Q99LI9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clp1Q99LI9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clp1Q99LI9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Clp1Q99LI9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clp1Q99LI9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clp1Q99LI9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.37■□□□□ 0.53
Clp1Q99LI9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.37■□□□□ 0.53
Clp1Q99LI9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Mzt1-203ENSMUST00000227948 952 ntBASIC18.37■□□□□ 0.53
Clp1Q99LI9 Birc2-201ENSMUST00000054878 378 ntBASIC18.37■□□□□ 0.53
Clp1Q99LI9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clp1Q99LI9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clp1Q99LI9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clp1Q99LI9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.35■□□□□ 0.53
Clp1Q99LI9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clp1Q99LI9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.35■□□□□ 0.53
Clp1Q99LI9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clp1Q99LI9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clp1Q99LI9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clp1Q99LI9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clp1Q99LI9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clp1Q99LI9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Gm15794-201ENSMUST00000120182 631 ntBASIC18.34■□□□□ 0.53
Clp1Q99LI9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clp1Q99LI9 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.34■□□□□ 0.53
Clp1Q99LI9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clp1Q99LI9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.33■□□□□ 0.53
Clp1Q99LI9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.33■□□□□ 0.53
Clp1Q99LI9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clp1Q99LI9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clp1Q99LI9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.33■□□□□ 0.53
Clp1Q99LI9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clp1Q99LI9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clp1Q99LI9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clp1Q99LI9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Mir8112-201ENSMUST00000184382 131 ntBASIC18.33■□□□□ 0.52
Clp1Q99LI9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Clp1Q99LI9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms