Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Gm10138-203ENSMUST00000206952 366 ntBASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.6□□□□□ -0.07
H1fooQ8VIK3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H1fooQ8VIK3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.58□□□□□ -0.07
H1fooQ8VIK3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
H1fooQ8VIK3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
H1fooQ8VIK3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
H1fooQ8VIK3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
H1fooQ8VIK3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
H1fooQ8VIK3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
H1fooQ8VIK3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Mir6349-201ENSMUST00000184059 97 ntBASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H1fooQ8VIK3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms