Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Gm6420-201ENSMUST00000193885 723 ntBASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdh18Q8VHR0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Gm42642-201ENSMUST00000200683 355 ntBASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Gm7514-201ENSMUST00000209475 934 ntBASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh18Q8VHR0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Nespas-201ENSMUST00000143738 1083 ntBASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Gm5874-201ENSMUST00000096101 508 ntBASIC16.77■□□□□ 0.28
Pcdh18Q8VHR0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh18Q8VHR0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh18Q8VHR0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh18Q8VHR0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh18Q8VHR0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh18Q8VHR0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms