Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Gm30025-201ENSMUST00000218555 728 ntBASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3kbp1Q8R550 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Sh3kbp1Q8R550 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Gm12382-201ENSMUST00000122005 922 ntBASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Sh3kbp1Q8R550 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Mir6349-201ENSMUST00000184059 97 ntBASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3kbp1Q8R550 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Mir2861-201ENSMUST00000175539 82 ntBASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.93■□□□□ 0.46
Sh3kbp1Q8R550 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sh3kbp1Q8R550 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms