Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Gm13158-201ENSMUST00000122007 736 ntBASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf113a1Q8R3P8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Gm10698-201ENSMUST00000182663 604 ntBASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Flg-201ENSMUST00000050758 1488 ntBASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf113a1Q8R3P8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf113a1Q8R3P8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Gm15378-201ENSMUST00000121894 207 ntBASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf113a1Q8R3P8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Gm11927-201ENSMUST00000118472 759 ntBASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf113a1Q8R3P8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms