Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Depdc1aQ8CIG0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1aQ8CIG0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Gm22697-201ENSMUST00000175194 63 ntBASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Depdc1aQ8CIG0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Gm18101-201ENSMUST00000215769 548 ntBASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1aQ8CIG0 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Depdc1aQ8CIG0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 Gm23634-201ENSMUST00000175071 91 ntBASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1aQ8CIG0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1aQ8CIG0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Depdc1aQ8CIG0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Depdc1aQ8CIG0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Depdc1aQ8CIG0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Depdc1aQ8CIG0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Depdc1aQ8CIG0 Mir1668-201ENSMUST00000184114 107 ntBASIC19.58■□□□□ 0.72
Depdc1aQ8CIG0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Depdc1aQ8CIG0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Depdc1aQ8CIG0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.58■□□□□ 0.72
Depdc1aQ8CIG0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Depdc1aQ8CIG0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.58■□□□□ 0.72
Depdc1aQ8CIG0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Depdc1aQ8CIG0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Depdc1aQ8CIG0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms