Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Calcoco1Q8CGU1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Calcoco1Q8CGU1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Calcoco1Q8CGU1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Calcoco1Q8CGU1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Calcoco1Q8CGU1 Gm6365-201ENSMUST00000054711 744 ntBASIC18.16■□□□□ 0.5
Calcoco1Q8CGU1 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.16■□□□□ 0.5
Calcoco1Q8CGU1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Calcoco1Q8CGU1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Calcoco1Q8CGU1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Calcoco1Q8CGU1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Calcoco1Q8CGU1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.15■□□□□ 0.5
Calcoco1Q8CGU1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Calcoco1Q8CGU1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Calcoco1Q8CGU1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Calcoco1Q8CGU1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Calcoco1Q8CGU1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Calcoco1Q8CGU1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms