Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Mir8112-201ENSMUST00000184382 131 ntBASIC18.49■□□□□ 0.55
Fam78aQ8C552 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam78aQ8C552 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam78aQ8C552 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam78aQ8C552 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.48■□□□□ 0.55
Fam78aQ8C552 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam78aQ8C552 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.48■□□□□ 0.55
Fam78aQ8C552 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Fam78aQ8C552 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.47■□□□□ 0.55
Fam78aQ8C552 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.47■□□□□ 0.55
Fam78aQ8C552 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam78aQ8C552 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.47■□□□□ 0.55
Fam78aQ8C552 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.47■□□□□ 0.55
Fam78aQ8C552 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.46■□□□□ 0.55
Fam78aQ8C552 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.46■□□□□ 0.55
Fam78aQ8C552 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Fam78aQ8C552 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.46■□□□□ 0.55
Fam78aQ8C552 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.46■□□□□ 0.55
Fam78aQ8C552 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam78aQ8C552 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.46■□□□□ 0.54
Fam78aQ8C552 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Actl10-202ENSMUST00000226583 1501 ntBASIC18.45■□□□□ 0.54
Fam78aQ8C552 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam78aQ8C552 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.44■□□□□ 0.54
Fam78aQ8C552 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.44■□□□□ 0.54
Fam78aQ8C552 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam78aQ8C552 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms