Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim35Q8C006 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.98■□□□□ 0.47
Trim35Q8C006 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 Gm43906-201ENSMUST00000203194 906 ntBASIC17.98■□□□□ 0.47
Trim35Q8C006 Gm7238-201ENSMUST00000206467 973 ntBASIC17.98■□□□□ 0.47
Trim35Q8C006 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim35Q8C006 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim35Q8C006 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim35Q8C006 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Trim35Q8C006 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim35Q8C006 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.98■□□□□ 0.47
Trim35Q8C006 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim35Q8C006 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.98■□□□□ 0.47
Trim35Q8C006 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
Trim35Q8C006 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Gm9520-201ENSMUST00000209460 1253 ntBASIC17.97■□□□□ 0.47
Trim35Q8C006 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim35Q8C006 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.97■□□□□ 0.47
Trim35Q8C006 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim35Q8C006 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Trim35Q8C006 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim35Q8C006 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim35Q8C006 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim35Q8C006 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Gm20049-201ENSMUST00000219950 730 ntBASIC17.96■□□□□ 0.47
Trim35Q8C006 AC132433.1-201ENSMUST00000221553 1101 ntBASIC17.96■□□□□ 0.47
Trim35Q8C006 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim35Q8C006 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim35Q8C006 Gm42651-201ENSMUST00000199851 1339 ntBASIC17.96■□□□□ 0.46
Trim35Q8C006 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim35Q8C006 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Trim35Q8C006 Gm43275-201ENSMUST00000202053 1020 ntBASIC17.95■□□□□ 0.46
Trim35Q8C006 AC153932.1-201ENSMUST00000218558 787 ntBASIC17.95■□□□□ 0.46
Trim35Q8C006 AC125539.1-201ENSMUST00000227423 622 ntBASIC17.95■□□□□ 0.46
Trim35Q8C006 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim35Q8C006 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim35Q8C006 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim35Q8C006 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim35Q8C006 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim35Q8C006 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.94■□□□□ 0.46
Trim35Q8C006 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim35Q8C006 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms