Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco3Q8BQM7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco3Q8BQM7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Gm8493-201ENSMUST00000196881 489 ntBASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco3Q8BQM7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Gm40848-201ENSMUST00000221998 324 ntBASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Smco3Q8BQM7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms