Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Idnk-204ENSMUST00000226010 1898 ntBASIC17.69■□□□□ 0.42
Sfr1Q8BP27 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Gm13401-201ENSMUST00000117074 291 ntBASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sfr1Q8BP27 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Sfr1Q8BP27 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Gm715-201ENSMUST00000117865 831 ntBASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sfr1Q8BP27 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Gm4974-201ENSMUST00000209974 875 ntBASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms