Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col16a1Q8BLX7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC22.94■■□□□ 1.26
Col16a1Q8BLX7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.94■■□□□ 1.26
Col16a1Q8BLX7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col16a1Q8BLX7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC22.94■■□□□ 1.26
Col16a1Q8BLX7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Col16a1Q8BLX7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Gm5864-201ENSMUST00000202263 970 ntBASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col16a1Q8BLX7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col16a1Q8BLX7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col16a1Q8BLX7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Gm12895-201ENSMUST00000122214 226 ntBASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Gm27000-201ENSMUST00000182943 842 ntBASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Col16a1Q8BLX7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC22.89■■□□□ 1.26
Col16a1Q8BLX7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC22.89■■□□□ 1.26
Col16a1Q8BLX7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Col16a1Q8BLX7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Col16a1Q8BLX7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Col16a1Q8BLX7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Col16a1Q8BLX7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Col16a1Q8BLX7 Dmtn-210ENSMUST00000228824 2377 ntBASIC22.89■■□□□ 1.25
Col16a1Q8BLX7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Col16a1Q8BLX7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col16a1Q8BLX7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Col16a1Q8BLX7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 AC153889.1-201ENSMUST00000219257 330 ntBASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Col16a1Q8BLX7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 AC122351.1-201ENSMUST00000220467 126 ntBASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col16a1Q8BLX7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Gm5712-201ENSMUST00000199748 1043 ntBASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Gm43347-201ENSMUST00000200226 580 ntBASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms