Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim6Q8BGE7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.51■□□□□ 0.55
Trim6Q8BGE7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim6Q8BGE7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim6Q8BGE7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim6Q8BGE7 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.48■□□□□ 0.55
Trim6Q8BGE7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim6Q8BGE7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim6Q8BGE7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.48■□□□□ 0.55
Trim6Q8BGE7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim6Q8BGE7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.48■□□□□ 0.55
Trim6Q8BGE7 Dancr-204ENSMUST00000132389 2347 ntBASIC18.48■□□□□ 0.55
Trim6Q8BGE7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Gm18671-201ENSMUST00000214826 683 ntBASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim6Q8BGE7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim6Q8BGE7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.46■□□□□ 0.54
Trim6Q8BGE7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms