Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm3Q80WV7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Srrm3Q80WV7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Srrm3Q80WV7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Srrm3Q80WV7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Srrm3Q80WV7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Srrm3Q80WV7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.14■□□□□ 0.49
Srrm3Q80WV7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.13■□□□□ 0.49
Srrm3Q80WV7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm3Q80WV7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm3Q80WV7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm3Q80WV7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms