Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Six4Q61321 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.58■□□□□ 0.4
Six4Q61321 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six4Q61321 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Six4Q61321 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Six4Q61321 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.58■□□□□ 0.4
Six4Q61321 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six4Q61321 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six4Q61321 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Six4Q61321 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Six4Q61321 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Gm21814-202ENSMUST00000203277 873 ntBASIC17.57■□□□□ 0.4
Six4Q61321 Gm3375-201ENSMUST00000203929 796 ntBASIC17.57■□□□□ 0.4
Six4Q61321 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.57■□□□□ 0.4
Six4Q61321 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.57■□□□□ 0.4
Six4Q61321 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six4Q61321 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Six4Q61321 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Six4Q61321 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Six4Q61321 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Six4Q61321 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Gm38027-201ENSMUST00000192315 235 ntBASIC17.56■□□□□ 0.4
Six4Q61321 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Six4Q61321 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six4Q61321 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Six4Q61321 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Six4Q61321 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.55■□□□□ 0.4
Six4Q61321 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Six4Q61321 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.55■□□□□ 0.4
Six4Q61321 Odf3b-204ENSMUST00000227834 930 ntBASIC17.55■□□□□ 0.4
Six4Q61321 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Six4Q61321 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Six4Q61321 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six4Q61321 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Six4Q61321 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Six4Q61321 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.54■□□□□ 0.4
Six4Q61321 Gm37055-201ENSMUST00000191866 133 ntBASIC17.54■□□□□ 0.4
Six4Q61321 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Six4Q61321 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.54■□□□□ 0.4
Six4Q61321 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six4Q61321 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Six4Q61321 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Six4Q61321 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Six4Q61321 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.53■□□□□ 0.4
Six4Q61321 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.53■□□□□ 0.4
Six4Q61321 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.53■□□□□ 0.4
Six4Q61321 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Six4Q61321 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six4Q61321 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms