Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav7d-4Q5R1H9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Gm11421-201ENSMUST00000122124 294 ntBASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-4Q5R1H9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-4Q5R1H9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms